In the present study, we further characterize the SDHD-ESR tamoxifen-inducible mouse model

In the present study, we further characterize the SDHD-ESR tamoxifen-inducible mouse model

, active site residues Q104, V113, F118, F205, N290, I293, N297, T298, T305 and H477 have been reported to play critical role in the orientation and anchoring of coumarin for oxidation while neighbouring residue such as T212 is believed to be involved in directing the access of coumarin to the binding site However, none of these contact sites involves residue R203 despite its location within the highly-conserved region of SRS2. In view of the data from our study and that of others, it is likely that R203S substitution have trivial effect on ligand binding for CYP2A6. Kim and colleagues have previously shown that substitution of K476 with Ala, Arg or Asp in CYP2A6 had decreased binding affinity for coumarin. Moreover, an additional mutant with K476E substitution had also exhibited low catalytic efficiency towards coumarin. Such findings are consistent with our present observation that, variant CYP2A621 with its K476R substitution, possessed weaker affinity towards coumarin and 8-MOP as reflected by higher Km and IC50 values. The PubMed ID:http://www.ncbi.nlm.nih.gov/pubmed/19651603 reduced catalytic efficiency of K476 mutants has been ascribed to perturbation of electron transfer as the residue is known to be involved in intermolecular electron transfer between CYP2A6 and reductase. The K476E mutation, in particular, showed a greatly decreased rate of NADPH oxidation, suggesting that the low enzymatic activity may be caused by a decrease in utilization of electrons. Furthermore, this mutation is located close to Phe480, which is known to be an important residue forming part of the compact, hydrophobic active cavity of CYP2A6 as revealed by the 7 Inhibition of CYP2A6 Alleles by 8-Methoxypsoralen X-ray crystallography study. Thus it is likely that point mutation in CYP2A621, from K476 to another strongly basic substitute Arg, while not altering the local polarity, may have altered the interaction of F480 with the coumarin and 8-MOP in our study due to the subtle changes in the residue size. Our docking data further supported the important role of K476 as the mutation has caused the largest volume increase in CYP2A6 active site cavity and the loss of H bond, resulting in increased CDIE value. Concurrent substitutions of amino acid residues adjacent to one another in CYP2A622 yielded significantly reduced binding affinity for coumarin and 8MOP, implying a major compromise in its enzymatic activity. Both D158E and L160I substitutions are located in the D-helix, which appears to be exterior to the putative active site of CYP2A6. This, together with our docking data, has indicated that D158E and L160I residues were involved in the `long-range’ interactions resulting in enlarged active site volume which may affect the folding and conformational changes in the protein distant regions involved in ligand egress, binding, orientation as well as heme binding. The role of L160 has also been supported by a previous study. Hadidi and co-workers reported that an individual homozygous for L160H mutation in CYP2A6 showed significantly enhanced coumarin 3-hydroxylation while lacking 7-hydroxylation activity. This information again supports the postulation that structural elements outside of the active site may have an important role in controlling the protein catalytic activity. In conclusion, we observed similar patterns of change in the IC50 and Km values of CYP2A615, CYP2A616, CYP2A621 and CYP2A622 in the oxidation of coumarin. HC-030031 cost Except for CYP2A616, all variants showed considerably compromised binding affini

Proton-pump inhibitor

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